Get FC and p values from a t test contrast — get_stats • midar

Get FC and p values from a t test contrast

Usage

get_stats(
  data,
  feature,
  grouping,
  group_case,
  group_ref,
  paired,
  min_groupsize = 3,
  log_transform = FALSE
)

Arguments

data: data.frame or tibble
feature: feature
grouping: grouping
group_case: case group
group_ref: reference group
paired: paired data
min_groupsize: min group size for t test
log_transform: log transform before t test

Value

tibble with p values, fdr and log2FC