Get lipid class, species and transition names — parse_lipid_feature_names • midar

This function retrieves lipid class, species and transition names from the feature_id column and adds them as columns to the dataset.

Usage

parse_lipid_feature_names(
  tbl,
  use_as_feature_class = "lipid_class_lcb",
  add_transition_names = FALSE,
  add_chain_composition = TRUE
)

Arguments

tbl: A data frame containing a feature_id column
use_as_feature_class: Set feature_class to lipid_class
add_transition_names: add transition name and transition group, based on information in square brackets in feature_id
add_chain_composition: add total_c and total_db to the dataset

Value

MidarExperiment object