Manual
MRMhub’s public functions group into a few pipeline stages: import and verification, processing and correction, quality control and filtering, and export, alongside the object and session utilities that support them. The map arranges the functions by stage, next to the QC charts for that stage, and links every name to its reference page. Where a stage has a companion article, its heading links there: QC & FILTER to the lipidomics workflow, and OBJECT & SESSION to the MRMhubExperiment data object.
The stages follow the recommended processing order, read from top to bottom. The QC-chart column lists the diagnostics available at each stage, and they can be drawn at any point to inspect the current state of the data. The final row groups the object and session utilities, which are not pipeline steps: the constructor, the accessors, and the plotting and session defaults.
Next steps
- MRMhub overview: the core function groups in context
- The MRMhubExperiment data object: the object every function operates on
- Function reference: every function with full parameter detail